article Open AccessTop 1% cited
Identifying bacterial genes and endosymbiont DNA with Glimmer
Bioinformatics · 2007 · Vol. 23(6) · pp. 673–679
Arthur L. Delcher✉(University of Maryland, College Park)Kirsten A. Bratke(Trinity College Dublin)Edwin C. Powers(Johns Hopkins University)Steven L. Salzberg(University of Maryland, College Park)
Abstract
Glimmer is OSI Certified Open Source and available at http://cbcb.umd.edu/software/glimmer.
Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsBacteriophages and microbial interactionsGenomeBiologyGeneComputational biologyHost (biology)Bacterial genome sizeDNA sequencingGenetics
MeSH terms
AlgorithmsAnimalsChromosome MappingDNA, BacterialSensitivity and SpecificitySoftwareSymbiosisReproducibility of ResultsArtifactsGenome, BacterialSequence Analysis, DNAProchloronDecapodiformes
Funding
- National Science Foundation
- National Institutes of Health
- National Institute of Allergy and Infectious Diseases
- Division of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases
Citations
3,177
FWCI
22.92
field-weighted impact
References
24
Percentile
100%
vs. same field & year
Citations per year
Cited by
RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes
Scientific Reports · 2015 · 2,826 citations
Targeted Restoration of the Intestinal Microbiota with a Simple, Defined Bacteriotherapy Resolves Relapsing Clostridium difficile Disease in Mice
PLoS Pathogens · 2012 · 538 citations
The role of the gut microbiome in the healthy adult status
Clinica Chimica Acta · 2015 · 462 citations
Producing polished prokaryotic pangenomes with the Panaroo pipeline
Genome biology · 2020 · 1,203 citations
Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training
Genome Research · 2008 · 1,105 citations
Prodigal: prokaryotic gene recognition and translation initiation site identification
BMC Bioinformatics · 2010 · 12,599 citations
References
Comparing the predicted and observed properties of proteins encoded in the genome of <i>Escherichia coli</i> K‐12
Electrophoresis · 1997 · 341 citations
Phylogenomics of the Reproductive Parasite Wolbachia pipientis wMel: A Streamlined Genome Overrun by Mobile Genetic Elements
PLoS Biology · 2004 · 862 citations
Database resources of the National Center for Biotechnology Information: update
Nucleic Acids Research · 2003 · 11,003 citations
Citation Network
How this paper connects to the literature. Drag to explore, click any node to open that paper.
