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Genome-wide classification and expression analysis of MYB transcription factor families in rice and Arabidopsis

BMC Genomics · 2012 · Vol. 13(1) · pp. 544–544

Amit Katiyar✉(National Research Centre on Plant Biotechnology)Shuchi Smita(Indian Agricultural Research Institute)Sangram K. Lenka(Indian Agricultural Research Institute)Ravi Rajwanshi(National Research Centre on Plant Biotechnology)Viswanathan Chinnusamy(Indian Agricultural Research Institute)K. C. Bansal(National Bureau of Plant Genetic Resources)

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Abstract

A comprehensive genome-wide analysis of chromosomal distribution, tandem repeats and phylogenetic relationship of MYB family genes in rice and Arabidopsis suggested their evolution via duplication. Genome-wide comparative analysis of MYB genes and their expression analysis identified several MYBs with potential role in development and stress response of plants.

Plant Gene Expression Analysis Plant Stress Responses and Tolerance Plant Molecular Biology ResearchMYBBiologyGeneticsArabidopsisGeneRNA splicingAlternative splicingGene familyExonTranscription factor

MeSH terms

Amino Acid SequenceChromosome MappingMultigene FamilyMolecular Sequence DataPhylogenyOryzaTranscription FactorsSequence AlignmentArabidopsisAlternative SplicingGene Expression Regulation, PlantEvolution, MolecularTandem Repeat SequencesArabidopsis ProteinsGene Components