article
GROMACS: A message-passing parallel molecular dynamics implementation
Computer Physics Communications · 1995 · Vol. 91(1-3) · pp. 43–56
Herman J. C. Berendsen✉David van der Spoel(University of Groningen)Rudi van Drunen(University of Groningen)
Protein Structure and DynamicsSpectroscopy and Quantum Chemical StudiesAdvanced Chemical Physics StudiesMessage passingComputer scienceParallel computingMessage Passing InterfaceDynamics (music)Computational scienceMolecular dynamicsPhysics
Citations
10,317
FWCI
2.30
field-weighted impact
References
16
Percentile
89%
vs. same field & year
Citations per year
Cited by
LINCS: A linear constraint solver for molecular simulations
Journal of Computational Chemistry · 1997 · 16,756 citations
Quantum Mechanical Continuum Solvation Models
Chemical Reviews · 2005 · 16,260 citations
Thermodynamically Consistent Force Fields for the Assembly of Inorganic, Organic, and Biological Nanostructures: The INTERFACE Force Field
Langmuir · 2012 · 1,020 citations
Going Backward: A Flexible Geometric Approach to Reverse Transformation from Coarse Grained to Atomistic Models
Journal of Chemical Theory and Computation · 2013 · 760 citations
Force Field Benchmark of Organic Liquids: Density, Enthalpy of Vaporization, Heat Capacities, Surface Tension, Isothermal Compressibility, Volumetric Expansion Coefficient, and Dielectric Constant
Journal of Chemical Theory and Computation · 2011 · 746 citations
General purpose molecular dynamics simulations fully implemented on graphics processing units
Journal of Computational Physics · 2008 · 1,497 citations
Scalable molecular dynamics with NAMD
Journal of Computational Chemistry · 2005 · 17,211 citations
A biomolecular force field based on the free enthalpy of hydration and solvation: The GROMOS force‐field parameter sets 53A5 and 53A6
Journal of Computational Chemistry · 2004 · 3,702 citations
References
Molecular dynamics with coupling to an external bath
The Journal of Chemical Physics · 1984 · 30,535 citations
The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin
Journal of the American Chemical Society · 1988 · 4,984 citations
Computer Simulation of Molecular Dynamics: Methodology, Applications, and Perspectives in Chemistry
Angewandte Chemie International Edition in English · 1990 · 1,539 citations
Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes
Journal of Computational Physics · 1977 · 21,225 citations
Citation Network
How this paper connects to the literature. Drag to explore, click any node to open that paper.
