article Open AccessTop 1% cited
Dynamic regulation of genome-wide pre-mRNA splicing and stress tolerance by the Sm-like protein LSm5 in Arabidopsis
Genome biology · 2014 · Vol. 15(1) · pp. R1–R1
Peng Cui✉(King Abdullah University of Science and Technology)Shoudong Zhang(King Abdullah University of Science and Technology)Feng Ding(King Abdullah University of Science and Technology)Shahjahan Ali(King Abdullah University of Science and Technology)Liming Xiong(King Abdullah University of Science and Technology)
Abstract
We conclude that SAD1 dynamically controls splicing efficiency and splice-site recognition in Arabidopsis, and propose that this may contribute to SAD1-mediated stress tolerance through the metabolism of transcripts expressed from stress-responsive genes. Our study not only provides novel insights into the function of Sm-like proteins in splicing, but also uncovers new means to improve splicing efficiency and to enhance stress tolerance in a higher eukaryote.
RNA Research and SplicingPlant Micronutrient Interactions and EffectsRNA and protein synthesis mechanismsBiologyArabidopsisRNA splicingHuman geneticsComputational biologyGenomeGeneticsAlternative splicingMessenger RNAEvolutionary biology
MeSH terms
RNA PrecursorsStress, PhysiologicalSequence AlignmentRNA-Binding ProteinsGene DeletionArabidopsisAlternative SplicingSequence Analysis, RNAGene Expression Regulation, PlantRNA, PlantGene Expression ProfilingArabidopsis ProteinsSalt ToleranceGenetic Association Studies
Funding
- King Abdullah University of Science and Technology
Citations
2,287
FWCI
21.78
field-weighted impact
References
51
Percentile
100%
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References
<scp>mapman</scp> : a user‐driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes
The Plant Journal · 2004 · 3,415 citations
Integrative genomics viewer
Nature Biotechnology · 2011 · 16,203 citations
Functional characterization of Arabidopsis NaCl-inducible WRKY25 and WRKY33 transcription factors in abiotic stresses
Plant Molecular Biology · 2008 · 657 citations
Cell Signaling during Cold, Drought, and Salt Stress
The Plant Cell · 2002 · 2,386 citations
GENEVESTIGATOR. Arabidopsis Microarray Database and Analysis Toolbox
PLANT PHYSIOLOGY · 2004 · 2,457 citations
TopHat: discovering splice junctions with RNA-Seq
Bioinformatics · 2009 · 12,093 citations
Fast and accurate short read alignment with Burrows–Wheeler transform
Bioinformatics · 2009 · 61,752 citations
Functional Analysis of an<i>Arabidopsis</i>Transcription Factor, DREB2A, Involved in Drought-Responsive Gene Expression
The Plant Cell · 2006 · 1,139 citations
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