Scinovex
article Open AccessTop 1% cited

Riemann Manifold Langevin and Hamiltonian Monte Carlo Methods

Mark GirolamiBen Calderhead

Abstract

Summary The paper proposes Metropolis adjusted Langevin and Hamiltonian Monte Carlo sampling methods defined on the Riemann manifold to resolve the shortcomings of existing Monte Carlo algorithms when sampling from target densities that may be high dimensional and exhibit strong correlations. The methods provide fully automated adaptation mechanisms that circumvent the costly pilot runs that are required to tune proposal densities for Metropolis–Hastings or indeed Hamiltonian Monte Carlo and Metropolis adjusted Langevin algorithms. This allows for highly efficient sampling even in very high dimensions where different scalings may be required for the transient and stationary phases of the Markov chain. The methodology proposed exploits the Riemann geometry of the parameter space of statistical models and thus automatically adapts to the local structure when simulating paths across this manifold, providing highly efficient convergence and exploration of the target density. The performance of these Riemann manifold Monte Carlo methods is rigorously assessed by performing inference on logistic regression models, log-Gaussian Cox point processes, stochastic volatility models and Bayesian estimation of dynamic systems described by non-linear differential equations. Substantial improvements in the time-normalized effective sample size are reported when compared with alternative sampling approaches. MATLAB code that is available from http://www.ucl.ac.uk/statistics/research/rmhmc allows replication of all the results reported.

Markov Chains and Monte Carlo MethodsStatistical Mechanics and EntropyGaussian Processes and Bayesian InferenceHybrid Monte CarloMonte Carlo methodMarkov chain Monte CarloStatistical physicsMonte Carlo integrationComputer scienceMonte Carlo molecular modelingMonte Carlo method in statistical physicsApplied mathematicsRejection sampling

Funding

  • Engineering and Physical Sciences Research Council
  • Biotechnology and Biological Sciences Research Council
Citations
1,510
FWCI
60.00
field-weighted impact
References
233
Percentile
100%
vs. same field & year
Citations per year
References
Slice sampling
The Annals of Statistics · 2003 · 1,333 citations
Particle Markov Chain Monte Carlo Methods
Journal of the Royal Statistical Society Series B (Statistical Methodology) · 2010 · 2,021 citations
Ricci curvature for metric-measure spaces via optimal transport
Annals of Mathematics · 2009 · 1,260 citations
Bayesian Calibration of Computer Models
Journal of the Royal Statistical Society Series B (Statistical Methodology) · 2001 · 4,079 citations
Equivariant adaptive source separation
IEEE Transactions on Signal Processing · 1996 · 1,350 citations
Monte Carlo Statistical Methods
Technometrics · 2000 · 5,577 citations
On Bayesian Analysis of Mixtures with an Unknown Number of Components (with discussion)
Journal of the Royal Statistical Society Series B (Statistical Methodology) · 1997 · 1,893 citations
Citation Network

How this paper connects to the literature. Drag to explore, click any node to open that paper.